Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
artMArginine transport system permease protein artM. (222 aa)    
Predicted Functional Partners:
artI
Arginine-binding periplasmic protein 1 precursor; Belongs to the bacterial solute-binding protein 3 family.
 
 0.993
artP
Arginine transport ATP-binding protein ArtP.
 
 
 0.993
artQ
Arginine transport system permease protein artQ.
 
 
0.983
plu0221
ABC transmembrane type-1 domain-containing protein; Unnamed protein product; Highly similar to amino acid permease component of ABC transporter.
  
  
  0.848
gltK
Glutamate/aspartate transport system permease protein GltK.
  
  
  0.848
plu4487
PBPb domain-containing protein; Unnamed protein product; Similar to amino acid ABC transporter (amino acid-binding protein).
  
 0.793
gltL
Glutamate/aspartate transport ATP-binding protein GltL.
 
  
 0.789
plu4484
PBPb domain-containing protein; Unnamed protein product; Similar to amino acid ABC transporter (Binding Protein); Belongs to the bacterial solute-binding protein 3 family.
  
 0.789
plu4486
Unnamed protein product; Similar to amino acid ABC transporter (ATP-binding protein).
 
  
 0.779
plu0219
Unnamed protein product; Highly similar to binding protein component of ABC transporter; Belongs to the bacterial solute-binding protein 3 family.
 
  
 0.769
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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