plu1653 protein (Photorhabdus laumondii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

plu1653

AAA domain-containing protein; Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with C-terminal region of AAA family ATPase. (699 aa)

Predicted Functional Partners:

plu1654

0.879

plu1652

0.862

plu1659

0.851

plu1664

0.851

plu1665

0.840

plu1666

0.840

plu1660

0.835

plu1667

0.824

plu1663

0.816

plu1657

0.815

Your Current Organism:

Photorhabdus laumondii

NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
plu1652	plu1653	Unnamed protein product; Highly similar to unknown protein of Photorhabdus.	AAA domain-containing protein; Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with C-terminal region of AAA family ATPase.	0.862
plu1652	plu1654	Unnamed protein product; Highly similar to unknown protein of Photorhabdus.	Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with unknown protein.	0.752
plu1652	plu1657	Unnamed protein product; Highly similar to unknown protein of Photorhabdus.	Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with unknown protein.	0.818
plu1652	plu1659	Unnamed protein product; Highly similar to unknown protein of Photorhabdus.	GPW_gp25 domain-containing protein; Unnamed protein product; Similar to base plate protein gp25 of Bacteriophage.	0.544
plu1652	plu1660	Unnamed protein product; Highly similar to unknown protein of Photorhabdus.	Unnamed protein product; Similar to unknown protein and some similarities with VgrG protein.	0.688
plu1652	plu1663	Unnamed protein product; Highly similar to unknown protein of Photorhabdus.	Unnamed protein product; Similar to unknown protein.	0.810
plu1652	plu1664	Unnamed protein product; Highly similar to unknown protein of Photorhabdus.	Phage_sheath_1C domain-containing protein; Unnamed protein product; Similar to unknown protein.	0.551
plu1652	plu1665	Unnamed protein product; Highly similar to unknown protein of Photorhabdus.	Unnamed protein product; Similar to unknown protein.	0.421
plu1652	plu1666	Unnamed protein product; Highly similar to unknown protein of Photorhabdus.	Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with phage-related contractile tail sheath protein.	0.452
plu1652	plu1667	Unnamed protein product; Highly similar to unknown protein of Photorhabdus.	Unnamed protein product; Similar to unknown protein.	0.614
plu1653	plu1652	AAA domain-containing protein; Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with C-terminal region of AAA family ATPase.	Unnamed protein product; Highly similar to unknown protein of Photorhabdus.	0.862
plu1653	plu1654	AAA domain-containing protein; Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with C-terminal region of AAA family ATPase.	Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with unknown protein.	0.879
plu1653	plu1657	AAA domain-containing protein; Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with C-terminal region of AAA family ATPase.	Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with unknown protein.	0.815
plu1653	plu1659	AAA domain-containing protein; Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with C-terminal region of AAA family ATPase.	GPW_gp25 domain-containing protein; Unnamed protein product; Similar to base plate protein gp25 of Bacteriophage.	0.851
plu1653	plu1660	AAA domain-containing protein; Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with C-terminal region of AAA family ATPase.	Unnamed protein product; Similar to unknown protein and some similarities with VgrG protein.	0.835
plu1653	plu1663	AAA domain-containing protein; Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with C-terminal region of AAA family ATPase.	Unnamed protein product; Similar to unknown protein.	0.816
plu1653	plu1664	AAA domain-containing protein; Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with C-terminal region of AAA family ATPase.	Phage_sheath_1C domain-containing protein; Unnamed protein product; Similar to unknown protein.	0.851
plu1653	plu1665	AAA domain-containing protein; Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with C-terminal region of AAA family ATPase.	Unnamed protein product; Similar to unknown protein.	0.840
plu1653	plu1666	AAA domain-containing protein; Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with C-terminal region of AAA family ATPase.	Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with phage-related contractile tail sheath protein.	0.840
plu1653	plu1667	AAA domain-containing protein; Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with C-terminal region of AAA family ATPase.	Unnamed protein product; Similar to unknown protein.	0.824

page 1 of 6

Server load: low (28%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About