Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
plu1748Uncharacterized protein; Truncated gene. Similar to C-terminal part of putative amidase YcbB precursor of Escherichia coli. (182 aa)    
Predicted Functional Partners:
plu1749
Lactamase_B domain-containing protein; Unnamed protein product; Highly similar to probable hydrolase YcbL of Escherichia coli.
  
    0.908
plu2238
Lactamase_B domain-containing protein; Unnamed protein product; Highly similar to Zn-dependent hydrolases and to AHL-lactonase.
  
    0.529
gloB
Hydroxyacylglutathione hydrolase (glyoxalase II); Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
  
    0.448
plu1188
Lactamase_B domain-containing protein; Unnamed protein product; Highly similar to putative exported protein and some similarities with type II beta-lactamase precursor.
  
    0.448
plu2582
Unnamed protein product; Highly similar to unknown protein YcjX of Escherichia coli (putative EC 2.1 enzyme).
  
     0.446
plu3616
UPF0231 protein plu3616; Unnamed protein product; Similar to unknown protein YacL of Escherichia coli; Belongs to the UPF0231 family.
  
     0.432
plu1195
YkuD domain-containing protein; Unnamed protein product; Similar to putative exported protein YafK of Escherichia coli.
  
    0.418
plu2616
LysM domain-containing protein; Unnamed protein product; Highly similar to unknown protein YnhG precursor and YcfS precursor of Escherichia coli.
 
     0.411
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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