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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu1801Unnamed protein product; Similar to myo-inositol catabolism protein IolC of Bacillus subtilis. (634 aa)    
Predicted Functional Partners:
plu1799
Unnamed protein product; Similar to myo-inositol catabolism iolB of Bacillus subtilis.
 
 
 0.999
plu1800
AP_endonuc_2 domain-containing protein; Unnamed protein product; Similar to myo-inositol catabolism IolE of Bacillus subtilis and to rhizopine catabolism protein.
  
 0.974
plu1805
Unnamed protein product; Similar to myo-inositol catabolism IolD of Bacillus subtilis; Belongs to the TPP enzyme family.
 
  
 0.943
plu1802
Unnamed protein product; Similar to oxidoreductase.
  
 0.942
plu1804
Unnamed protein product; Similar to myo-inositol dehydrogenase.
 
  
 0.874
plu1807
Unnamed protein product; Similar to unknown protein and to probable transcriptional regulator.
 
   
 0.812
plu0727
AP_endonuc_2 domain-containing protein; Unnamed protein product; Some similarities with D-tagatose 3-epimerase-related protein.
 
  
 0.666
plu0726
Unnamed protein product; Hypothetical protein.
  
  
 0.613
rbsD
High affinity ribose transport protein RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.572
rbsA
Ribose transport ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
  
 0.543
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.