Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu1804Unnamed protein product; Similar to myo-inositol dehydrogenase. (328 aa)    
Predicted Functional Partners:
plu1800
AP_endonuc_2 domain-containing protein; Unnamed protein product; Similar to myo-inositol catabolism IolE of Bacillus subtilis and to rhizopine catabolism protein.
 
 
 0.981
plu0934
Unnamed protein product; Weakly similar to Inositol-1-monophosphatase (IMPase), SuhB protein of Escherichia coli.
    
 0.903
suhB
Inositol-1-monophosphatase (IMPase) (Inositol-1-phosphatase) (I-1-Pase).
    
 0.903
plu1805
Unnamed protein product; Similar to myo-inositol catabolism IolD of Bacillus subtilis; Belongs to the TPP enzyme family.
 
  
 0.900
plu1801
Unnamed protein product; Similar to myo-inositol catabolism protein IolC of Bacillus subtilis.
 
  
 0.848
plu1799
Unnamed protein product; Similar to myo-inositol catabolism iolB of Bacillus subtilis.
 
  
 0.839
plu1807
Unnamed protein product; Similar to unknown protein and to probable transcriptional regulator.
 
     0.642
plu1803
Unnamed protein product; Similar to putative Na+/myo-inositol transporter protein YidK of Escherichia coli; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.614
plu1806
Aldedh domain-containing protein; Unnamed protein product; Similar to probable aldehyde dehydrogenase.
 
  
 0.582
lysS
Lysyl-tRNA synthetase (Lysine--tRNA ligase); Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.535
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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