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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu1804Unnamed protein product; Similar to myo-inositol dehydrogenase. (328 aa)    
Predicted Functional Partners:
plu1800
AP_endonuc_2 domain-containing protein; Unnamed protein product; Similar to myo-inositol catabolism IolE of Bacillus subtilis and to rhizopine catabolism protein.
 
 
 0.987
plu1805
Unnamed protein product; Similar to myo-inositol catabolism IolD of Bacillus subtilis; Belongs to the TPP enzyme family.
 
  
 0.944
plu2375
Unnamed protein product; Similar to hypothetical oxidoreductase YdgJ of Escherichia coli.
  
 
 
0.911
plu1799
Unnamed protein product; Similar to myo-inositol catabolism iolB of Bacillus subtilis.
 
  
 0.907
plu0934
Unnamed protein product; Weakly similar to Inositol-1-monophosphatase (IMPase), SuhB protein of Escherichia coli.
    
 0.904
suhB
Inositol-1-monophosphatase (IMPase) (Inositol-1-phosphatase) (I-1-Pase).
    
 0.904
plu1801
Unnamed protein product; Similar to myo-inositol catabolism protein IolC of Bacillus subtilis.
 
  
 0.874
plu0727
AP_endonuc_2 domain-containing protein; Unnamed protein product; Some similarities with D-tagatose 3-epimerase-related protein.
 
  
 0.650
plu1807
Unnamed protein product; Similar to unknown protein and to probable transcriptional regulator.
 
     0.641
plu1806
Aldedh domain-containing protein; Unnamed protein product; Similar to probable aldehyde dehydrogenase.
 
    0.622
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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