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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu1817HTH luxR-type domain-containing protein; Unnamed protein product; Similar to colanic acid capsular biosynthesis activation protein A (polysaccharide synthesis regulation protein) RcsA of Escherichia coli. (200 aa)    
Predicted Functional Partners:
plu1818
Unnamed protein product; Similar to unknown protein YceP of Escherichia coli.
 
     0.757
arcB
Aerobic respiration control sensor protein.
   
 
 0.753
barA
Sensor protein BarA.
   
 
 0.685
bvgS
Virulence sensor protein BvgS precursor.
   
 
 0.685
plu3067
Unnamed protein product; Similar to unknown protein YfaZ precursor of Escherichia coli.
  
     0.593
rcsD
Phosphotransferase RcsD; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB.
 
 
 
 0.592
plu2232
UPF0482 protein plu2232; Unnamed protein product; Similar to unknown protein YnfB precursor of Escherichia coli; Belongs to the UPF0482 family.
  
     0.580
plu2548
HTH lysR-type domain-containing protein; Unnamed protein product; Some similarities with transcription regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
    0.548
fepE
Ferric enterobactin transport protein.
  
     0.529
plu4274
HTH luxR-type domain-containing protein; Unnamed protein product; Similar to monoamine regulon transcriptional regulator MoaR.
      
 0.526
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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