STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu1817HTH luxR-type domain-containing protein; Unnamed protein product; Similar to colanic acid capsular biosynthesis activation protein A (polysaccharide synthesis regulation protein) RcsA of Escherichia coli. (200 aa)    
Predicted Functional Partners:
plu1818
Unnamed protein product; Similar to unknown protein YceP of Escherichia coli.
 
     0.757
arcB
Aerobic respiration control sensor protein.
   
 
 0.690
plu3067
Unnamed protein product; Similar to unknown protein YfaZ precursor of Escherichia coli.
  
     0.593
barA
Sensor protein BarA.
   
 
 0.582
plu2232
UPF0482 protein plu2232; Unnamed protein product; Similar to unknown protein YnfB precursor of Escherichia coli; Belongs to the UPF0482 family.
  
     0.580
plu2548
HTH lysR-type domain-containing protein; Unnamed protein product; Some similarities with transcription regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
    0.548
plu4274
HTH luxR-type domain-containing protein; Unnamed protein product; Similar to monoamine regulon transcriptional regulator MoaR.
      
 0.540
plu4288
HTH luxR-type domain-containing protein; Unnamed protein product; Similar to LuxR family transcriptional regulators.
      
 0.540
rcsD
Phosphotransferase RcsD; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB.
 
 
 
 0.535
fepE
Ferric enterobactin transport protein.
  
     0.529
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.