| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dnaN | plu1037 | plu0002 | plu1037 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | Toprim domain-containing protein; Unnamed protein product; Similar to DNA topoisomerase III. | 0.527 |
| dnaN | plu1828 | plu0002 | plu1828 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | MobA_MobL domain-containing protein; Unnamed protein product; Some similarities with nicking enzyme (TraA). | 0.592 |
| dnaN | plu4452 | plu0002 | plu4452 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | Unnamed protein product; Similar to ATP-dependent DNA helicase. | 0.602 |
| dnaN | polA | plu0002 | plu0386 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.972 |
| dnaN | topA | plu0002 | plu2435 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | DNA topoisomerase I (omega protein) (relaxing enzyme) (untwisting enzyme) (swivelase); Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then un [...] | 0.527 |
| plu1037 | dnaN | plu1037 | plu0002 | Toprim domain-containing protein; Unnamed protein product; Similar to DNA topoisomerase III. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.527 |
| plu1037 | plu1828 | plu1037 | plu1828 | Toprim domain-containing protein; Unnamed protein product; Similar to DNA topoisomerase III. | MobA_MobL domain-containing protein; Unnamed protein product; Some similarities with nicking enzyme (TraA). | 0.420 |
| plu1037 | plu4452 | plu1037 | plu4452 | Toprim domain-containing protein; Unnamed protein product; Similar to DNA topoisomerase III. | Unnamed protein product; Similar to ATP-dependent DNA helicase. | 0.897 |
| plu1037 | polA | plu1037 | plu0386 | Toprim domain-containing protein; Unnamed protein product; Similar to DNA topoisomerase III. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.604 |
| plu1037 | topA | plu1037 | plu2435 | Toprim domain-containing protein; Unnamed protein product; Similar to DNA topoisomerase III. | DNA topoisomerase I (omega protein) (relaxing enzyme) (untwisting enzyme) (swivelase); Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then un [...] | 0.530 |
| plu1827 | plu1828 | plu1827 | plu1828 | KAP NTPase domain-containing protein; Unnamed protein product; Some similarities with unknown protein. | MobA_MobL domain-containing protein; Unnamed protein product; Some similarities with nicking enzyme (TraA). | 0.594 |
| plu1828 | dnaN | plu1828 | plu0002 | MobA_MobL domain-containing protein; Unnamed protein product; Some similarities with nicking enzyme (TraA). | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.592 |
| plu1828 | plu1037 | plu1828 | plu1037 | MobA_MobL domain-containing protein; Unnamed protein product; Some similarities with nicking enzyme (TraA). | Toprim domain-containing protein; Unnamed protein product; Similar to DNA topoisomerase III. | 0.420 |
| plu1828 | plu1827 | plu1828 | plu1827 | MobA_MobL domain-containing protein; Unnamed protein product; Some similarities with nicking enzyme (TraA). | KAP NTPase domain-containing protein; Unnamed protein product; Some similarities with unknown protein. | 0.594 |
| plu1828 | plu1829 | plu1828 | plu1829 | MobA_MobL domain-containing protein; Unnamed protein product; Some similarities with nicking enzyme (TraA). | Unnamed protein product; Hypothetical gene. | 0.484 |
| plu1828 | plu3350 | plu1828 | plu3350 | MobA_MobL domain-containing protein; Unnamed protein product; Some similarities with nicking enzyme (TraA). | Unnamed protein product; Similar to hypothetical transmembrane protein of Ralstonia solanacearum. | 0.536 |
| plu1828 | plu4452 | plu1828 | plu4452 | MobA_MobL domain-containing protein; Unnamed protein product; Some similarities with nicking enzyme (TraA). | Unnamed protein product; Similar to ATP-dependent DNA helicase. | 0.451 |
| plu1828 | polA | plu1828 | plu0386 | MobA_MobL domain-containing protein; Unnamed protein product; Some similarities with nicking enzyme (TraA). | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.435 |
| plu1828 | recB | plu1828 | plu0632 | MobA_MobL domain-containing protein; Unnamed protein product; Some similarities with nicking enzyme (TraA). | Exodeoxyribonuclease V beta chain; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repai [...] | 0.733 |
| plu1828 | recC | plu1828 | plu0630 | MobA_MobL domain-containing protein; Unnamed protein product; Some similarities with nicking enzyme (TraA). | Exodeoxyribonuclease V gamma chain; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repa [...] | 0.689 |
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