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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu1882Sugarporin_N domain-containing protein; Unnamed protein product; Similar to putative glycoporin. Putative secreted protein. (468 aa)    
Predicted Functional Partners:
plu2935
Unnamed protein product; Some similarities with bacteriophage recombination protein.
  
     0.675
plu2905
Unnamed protein product; Similar to bacteriophage lambda endopeptidase.
  
     0.620
plu2936
YqaJ domain-containing protein; Unnamed protein product; Similar to bacteriophage exonuclease.
  
     0.618
plu3747
Unnamed protein product; Similar to probable endopeptidase gp15 protein of lamdoid prophage.
  
     0.614
plu2053
Unnamed protein product; Similar to ATPase components (ABC2) of ABC transporter.
  
     0.584
plu0203
Unnamed protein product; Some similarities with putative transport protein.
  
     0.565
plu3421
Unnamed protein product; Some similarities with lambda tail fiber assembly protein G.
  
     0.555
plu2961
Unnamed protein product; Similar to bacteriophage tail fiber protein.
  
     0.540
plu3506
Unnamed protein product; Similar to ccm gene codes for both Ccm1 and Ccm2 proteins of Proteus mirabilis.
  
     0.501
plu2268
HTH_17 domain-containing protein; Unnamed protein product; Some similarities with putative excisionase.
  
     0.497
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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