Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu1900Unnamed protein product; Similar to unknown protein of Photorhabdus. (523 aa)    
Predicted Functional Partners:
plu0643
P/Homo B domain-containing protein; Unnamed protein product; The central region presents some similarities with proprotein convertase. Putative transmembrane protein.
  
 
 0.928
plu1901
Unnamed protein product; Similar to unknown protein of Photorhabdus.
       0.773
plu1902
Unnamed protein product; Similar to unknown protein of Photorhabdus.
 
   
0.763
plu1903
Unnamed protein product; Similar to unknown protein of Photorhabdus.
 
   
0.677
plu3324
Peptidase C80 domain-containing protein; Unnamed protein product; Similar to RTX toxin RtxA.
  
 
 0.618
plu1904
Unnamed protein product; Similar to unknown protein of Photorhabdus.
 
   
0.609
plu1905
Unnamed protein product; Similar to unknown protein of Photorhabdus.
 
   
0.570
plu1906
Unnamed protein product; Similar to unknown protein of Photorhabdus.
 
   
0.530
plu1907
Unnamed protein product; Similar to unknown protein of Photorhabdus.
 
   
0.507
ftsK
Cell division protein.
    
 
 0.505
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.