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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliARNA polymerase sigma factor for flagellar operon (Sigma-F factor) (Sigma-27) (Sigma-28); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (240 aa)    
Predicted Functional Partners:
flgM
Negative regulator of flagellin synthesis (Anti-sigma-28 factor) FlgM.
 
 0.995
flgC
Flagellar basal-body rod protein FlgC (Putative proximal rod protein); Belongs to the flagella basal body rod proteins family.
 
 
 0.967
flgK
Flagellar hook-associated protein 1 (HAP1).
 
  
 0.965
flgB
Flagellar basal-body rod protein FlgB (Putative proximal rod protein); Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.961
fliM
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
 
 0.953
flgD
Basal-body rod modification protein FlgD (flagellar protein for the initiation of hook assembly); Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.948
flgE
Flagellar hook protein FlgE.
 
  
 0.948
fliZ
FliZ protein.
  
  
 0.947
flgF
Flagellar basal-body rod protein FlgF (Putative proximal rod protein).
 
  
 0.944
flgL
Flagellar hook-associated protein 3 (HAP3) (Hook-filament junction protein).
 
  
 0.937
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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