Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
fbaB | katE | plu2781 | plu3068 | Fructose-biphosphate aldolase class I (FBP aldolase). | Catalase; Belongs to the catalase family. | 0.795 |
fbaB | osmY | plu2781 | plu4248 | Fructose-biphosphate aldolase class I (FBP aldolase). | Osmotically inducible protein Y precursor. | 0.663 |
fbaB | plu3994 | plu2781 | plu3994 | Fructose-biphosphate aldolase class I (FBP aldolase). | Unnamed protein product; Similar to putative membrane protein YqjD of Escherichia coli. | 0.518 |
fbaB | tktA | plu2781 | plu0946 | Fructose-biphosphate aldolase class I (FBP aldolase). | Transketolase 1; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.935 |
fbaB | wrbA | plu2781 | plu1964 | Fructose-biphosphate aldolase class I (FBP aldolase). | NAD(P)H dehydrogenase (quinone); Weakly similar to transposase. | 0.641 |
katE | fbaB | plu3068 | plu2781 | Catalase; Belongs to the catalase family. | Fructose-biphosphate aldolase class I (FBP aldolase). | 0.795 |
katE | osmY | plu3068 | plu4248 | Catalase; Belongs to the catalase family. | Osmotically inducible protein Y precursor. | 0.500 |
katE | plu2262 | plu3068 | plu2262 | Catalase; Belongs to the catalase family. | Unnamed protein product; Some similarities with molybdopterin oxidoreductase and dimethylsulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.409 |
katE | tktA | plu3068 | plu0946 | Catalase; Belongs to the catalase family. | Transketolase 1; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.468 |
katE | wrbA | plu3068 | plu1964 | Catalase; Belongs to the catalase family. | NAD(P)H dehydrogenase (quinone); Weakly similar to transposase. | 0.529 |
osmY | fbaB | plu4248 | plu2781 | Osmotically inducible protein Y precursor. | Fructose-biphosphate aldolase class I (FBP aldolase). | 0.663 |
osmY | katE | plu4248 | plu3068 | Osmotically inducible protein Y precursor. | Catalase; Belongs to the catalase family. | 0.500 |
osmY | plu3854 | plu4248 | plu3854 | Osmotically inducible protein Y precursor. | Unnamed protein product; Similar to probable lipoprotein YbaY precursor of Escherichia coli. | 0.764 |
osmY | plu3994 | plu4248 | plu3994 | Osmotically inducible protein Y precursor. | Unnamed protein product; Similar to putative membrane protein YqjD of Escherichia coli. | 0.734 |
osmY | wrbA | plu4248 | plu1964 | Osmotically inducible protein Y precursor. | NAD(P)H dehydrogenase (quinone); Weakly similar to transposase. | 0.545 |
pilL | wrbA | plu1049 | plu1964 | PilL protein; Some similarities with PilL protein. | NAD(P)H dehydrogenase (quinone); Weakly similar to transposase. | 0.553 |
plu1965 | wrbA | plu1965 | plu1964 | AA_permease domain-containing protein; Unnamed protein product; Highly similar to D-serine/D-alanine/glycine transporter CycA. | NAD(P)H dehydrogenase (quinone); Weakly similar to transposase. | 0.403 |
plu2262 | katE | plu2262 | plu3068 | Unnamed protein product; Some similarities with molybdopterin oxidoreductase and dimethylsulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Catalase; Belongs to the catalase family. | 0.409 |
plu2262 | wrbA | plu2262 | plu1964 | Unnamed protein product; Some similarities with molybdopterin oxidoreductase and dimethylsulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | NAD(P)H dehydrogenase (quinone); Weakly similar to transposase. | 0.441 |
plu3854 | osmY | plu3854 | plu4248 | Unnamed protein product; Similar to probable lipoprotein YbaY precursor of Escherichia coli. | Osmotically inducible protein Y precursor. | 0.764 |
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