Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
wrbANAD(P)H dehydrogenase (quinone); Weakly similar to transposase. (199 aa)    
Predicted Functional Partners:
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.900
fbaB
Fructose-biphosphate aldolase class I (FBP aldolase).
   
    0.718
plu3994
Unnamed protein product; Similar to putative membrane protein YqjD of Escherichia coli.
   
    0.688
plu3854
Unnamed protein product; Similar to probable lipoprotein YbaY precursor of Escherichia coli.
   
    0.685
osmY
Osmotically inducible protein Y precursor.
   
    0.638
katE
Catalase; Belongs to the catalase family.
  
  
 0.512
pilL
PilL protein; Some similarities with PilL protein.
   
    0.495
qor
Quinone oxidoreductase (NADPH:quinone reductase) (zeta-crystallin homolog protein).
  
  
 0.444
tktA
Transketolase 1; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
   
  
 0.431
plu2751
Arsenate reductase; Unnamed protein product; Similar to putative oxidoreductase YfgD of Escherichia coli.
  
    0.413
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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