STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu1981Unnamed protein product; Weakly similar to putative sugar transport protein SgaT of Escherichia coli. (418 aa)    
Predicted Functional Partners:
sgcA
Putative phosphotransferase enzyme II, A component SgcA.
 
 
 0.997
sgaB
Putative sugar phosphotransferase component II B.
 
 
 0.997
ptsH
Phosphocarrier protein HPr (Histidine-containing protein).
    
  0.902
plu1982
Unnamed protein product; Hypothetical gene.
       0.773
fruA
PTS system, fructose-specific IIBC component.
  
  
 0.647
plu0585
Unnamed protein product; Similar to beta-glucoside permease IIABC component (phosphotransferase enzyme II, ABC component). Putative transmembrane protein.
 
  
 0.638
php
Phosphotriesterase homology protein.
 
    0.475
murP
N-acetylmuramic acid-specific phosphotransferase enzyme IIB component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This system is involved in N-acetylmuramic acid (MurNAc) transport, yielding cytoplasmic MurNAc-6-P. Is also able to take up anhydro-N-acetylmuramic acid (anhMurNAc), but cannot phosphorylate the carbon 6, probably because of the 1,6-anhydro ring.
  
  
 0.473
plu1978
HTH lacI-type domain-containing protein; Unnamed protein product; Similar to LacI-family transcriptional regulatory protein.
       0.463
plu1999
Unnamed protein product; Similar to putative transport system permease protein YhfT of Escherichia coli.
  
    0.443
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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