STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu1995PRD domain-containing protein; Unnamed protein product; Similar to unknown protein YhfY of Escherichia coli. (118 aa)    
Predicted Functional Partners:
plu1994
Unnamed protein product; Similar to unknown protein YhfZ of Escherichia coli.
  
    0.780
fruA
PTS system, fructose-specific IIBC component.
  
  
 0.720
fruB
PTS system, fructose-specific IIA/FPr component.
  
 
 0.712
plu0585
Unnamed protein product; Similar to beta-glucoside permease IIABC component (phosphotransferase enzyme II, ABC component). Putative transmembrane protein.
  
 
 0.664
plu1996
Ala_racemase_N domain-containing protein; Unnamed protein product; Similar to unknown protein YhfX of Escherichia coli.
       0.551
php
Phosphotriesterase homology protein.
       0.500
plu1998
Unnamed protein product; Similar to unknown protein YhfU of Escherichia coli.
       0.500
murP
N-acetylmuramic acid-specific phosphotransferase enzyme IIB component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This system is involved in N-acetylmuramic acid (MurNAc) transport, yielding cytoplasmic MurNAc-6-P. Is also able to take up anhydro-N-acetylmuramic acid (anhMurNAc), but cannot phosphorylate the carbon 6, probably because of the 1,6-anhydro ring.
  
 
 0.459
bglF
Beta-glucoside-specific phosphotransferase system-dependent permease.
  
 
 0.459
nagE
PTS system, N-acetylglucosamine-specific IIABC component (EIIABC-NAG) (N-acetylglucosamine-permease IIABC component) (Phosphotransferase enzyme II, ABC component) (EII-NAG).
  
 
 0.459
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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