STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2009HTH luxR-type domain-containing protein; Unnamed protein product; Similar to transcriptional regulator, LuxR family. (227 aa)    
Predicted Functional Partners:
arcB
Aerobic respiration control sensor protein.
 
 
 
 0.791
barA
Sensor protein BarA.
   
 
 0.685
bvgS
Virulence sensor protein BvgS precursor.
   
 
 0.685
plu1483
RES domain-containing protein; Unnamed protein product; Hypothetical gene.
  
     0.524
plu1482
DUF2384 domain-containing protein; Unnamed protein product; Hypothetical gene.
  
 
   0.511
plu3801
TauD domain-containing protein; Unnamed protein product; Weakly similar to putative oxygenase.
  
     0.483
plu3383
Unnamed protein product; Similar to unknown protein of Photorhabdus.
  
     0.474
plu3384
Baseplate_J domain-containing protein; Unnamed protein product; Weakly similar to unknown bacteriophage protein.
  
     0.466
plu3647
Unnamed protein product; Similar to unknown protein.
  
     0.457
plu0305
GAPES3 domain-containing protein; Unnamed protein product; Similar to putative membrane protein YhjK of Escherichia coli.
  
 
   0.453
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.