STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2013HTH luxR-type domain-containing protein; Truncated gene. Some similarities with probable transcriptional regulator, LuxR family protein of Photorhabdus. (226 aa)    
Predicted Functional Partners:
plu2012
HTH luxR-type domain-containing protein; Unnamed protein product; Weakly similar to transcriptional regulator, LuxR family.
 
    
0.748
arcB
Aerobic respiration control sensor protein.
 
 
 
 0.734
barA
Sensor protein BarA.
   
 
 0.582
bvgS
Virulence sensor protein BvgS precursor.
 
 
 
 0.561
plu1483
RES domain-containing protein; Unnamed protein product; Hypothetical gene.
  
     0.539
plu1482
DUF2384 domain-containing protein; Unnamed protein product; Hypothetical gene.
  
 
   0.506
plu3647
Unnamed protein product; Similar to unknown protein.
  
     0.503
plu3384
Baseplate_J domain-containing protein; Unnamed protein product; Weakly similar to unknown bacteriophage protein.
  
     0.501
plu3383
Unnamed protein product; Similar to unknown protein of Photorhabdus.
  
     0.500
plu2015
HTH luxR-type domain-containing protein; Unnamed protein product; Weakly similar to transcriptional regulator, LuxR family.
 
    
0.474
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.