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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2019HTH luxR-type domain-containing protein; Unnamed protein product; Similar to transcriptional regulator, LuxR family. (224 aa)    
Predicted Functional Partners:
plu1483
RES domain-containing protein; Unnamed protein product; Hypothetical gene.
  
     0.569
plu1482
DUF2384 domain-containing protein; Unnamed protein product; Hypothetical gene.
  
     0.562
rfaZ
Lipopolysaccharide core biosynthesis protein RfaZ.
  
     0.473
plu3647
Unnamed protein product; Similar to unknown protein.
  
     0.446
plu3384
Baseplate_J domain-containing protein; Unnamed protein product; Weakly similar to unknown bacteriophage protein.
  
     0.429
plu3383
Unnamed protein product; Similar to unknown protein of Photorhabdus.
  
     0.422
arcB
Aerobic respiration control sensor protein.
  
   
 0.415
plu3404
Phage_Mu_F domain-containing protein; Unnamed protein product; Weakly similar to unknown protein.
  
     0.406
plu2249
Unnamed protein product; Some similarities with unknown protein. Putative secreted protein.
  
     0.400
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.