Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
uvrYTranscription regulator. (221 aa)    
Predicted Functional Partners:
barA
Sensor protein BarA.
 
 
 0.990
plu0320
HTH luxR-type domain-containing protein; Unnamed protein product; Similar to probable transcription regulator SdiA of Escherichia coli.
  
  
 0.918
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
     
 0.827
plu2041
Histidine kinase domain-containing protein; Unnamed protein product; Similar to nitrate/nitrite sensor protein NarX.
 
 
 0.797
arcB
Aerobic respiration control sensor protein.
 
 
 
 0.768
uhpB
Two-component sensor histidine kinase UhpB, phosphorylates UhpA.
 
 
 
 0.714
ompR
Two-component response regulator.
  
 
 
 0.695
phoP
Two-component response regulator PhoP.
  
 
 
 0.659
cheB
Protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
   
 0.642
cheA
Chemotaxis protein cheA.
 
  
 0.638
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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