Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
plu2040FAD-binding FR-type domain-containing protein; Unnamed protein product; Similar to vibriobactin utilization protein ViuB. (277 aa)    
Predicted Functional Partners:
plu2324
Unnamed protein product; N-terminal region highly similar Irp5 protein and C-terminal region similar to Irp9 protein of Yersinia enterocolitica.
 
  
 0.923
plu1880
Unnamed protein product; Similar to proteins involved in antibiotic biosynthesis. Putative transmembrane protein.
  
  
 0.896
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
  
  
 0.733
entE
2,3-dihydroxybenzoate--[carrier protein] ligase (enterobactin synthetase component E).
 
  
 0.710
plu2633
Unnamed protein product; Highly similar to hemin transport protein HemS/HmuS/ChuS.
 
    0.680
plu2320
Unnamed protein product; Similar to HMWP2 protein of Yersinia enterocolitica.
 
  
 0.669
plu3923
Condensation domain-containing protein; Unnamed protein product; Weakly similar to synthetases (pyoverdine synthetase B, actinomycin synthetase II AcmB, mycosubtilin synthetase chain MycB...).
  
  
 0.577
plu2850
Unnamed protein product; Similar to outer membrane protein precursor.
  
  
 0.563
entB
Isochorismatase (2,3-dihydro-2,3-dihydroxybenzoate synthetase).
 
  
 0.554
fepB
Ferric enterobactin binding periplasmic protein precursor FepB.
 
  
 0.554
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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