Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
plu2041Histidine kinase domain-containing protein; Unnamed protein product; Similar to nitrate/nitrite sensor protein NarX. (410 aa)    
Predicted Functional Partners:
narP
Nitrate/nitrite response regulator protein NarP.
 
 
 0.905
uhpA
Two-component response regulator. Hexose phosphate transport system regulatory protein UhpA.
 
 
 0.827
bvgR
Two-component response regulator BvgR protein.
 
 
 0.818
rcsB
Capsular synthesis regulator component B; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions.
 
 
 0.805
uvrY
Transcription regulator.
 
 
 0.797
plu4288
HTH luxR-type domain-containing protein; Unnamed protein product; Similar to LuxR family transcriptional regulators.
 
 
 0.665
arcB
Aerobic respiration control sensor protein.
  
  
 0.663
plu4274
HTH luxR-type domain-containing protein; Unnamed protein product; Similar to monoamine regulon transcriptional regulator MoaR.
  
     0.539
plu2040
FAD-binding FR-type domain-containing protein; Unnamed protein product; Similar to vibriobactin utilization protein ViuB.
       0.499
plu2043
Unnamed protein product; Similar to quinol oxidase subunit I.
     
 0.487
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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