Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rimJ[ribosomal protein S5]-alanine N-acetyltransferase; Ribosomal-protein-alanine acetyltransferase (Acetylating enzyme for N-terminal of ribosomal protein S5). (194 aa)    
Predicted Functional Partners:
plu1583
Unnamed protein product; Similar to putative sensory transduction regulator YbjN of Escherichia coli.
  
     0.604
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
  
  
 0.532
mdtH
Multidrug resistance protein MdtH; Unnamed protein product; Highly similar to probable permease YceL of Escherichia coli.
       0.521
rnc
Ribonuclease III (RNase III); Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.521
plu1880
Unnamed protein product; Similar to proteins involved in antibiotic biosynthesis. Putative transmembrane protein.
 
   
 0.508
plu2088
Unnamed protein product; Similar to putative lipoprotein YceB of Escherichia coli.
       0.466
plu2581
Unnamed protein product; Highly similar to membrane protein YcjF of Escherichia coli.
 
     0.443
plu3557
HD_domain domain-containing protein; Unnamed protein product; Similar to unknown protein.
 
     0.413
rimI
[Ribosomal protein S18]-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
   
  
 0.409
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.