STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2156Unnamed protein product; Similar to fimbrial adhesin precursor. (330 aa)    
Predicted Functional Partners:
plu2157
Unnamed protein product; Similar to hypothetical outer membrane usher protein YraJ precursor of Escherichia coli.
 
 
 0.966
plu2158
Unnamed protein product; Similar to hypothetical fimbrial chaperone YraI precursor of Escherichia coli.
 
 
 0.948
plu2159
Unnamed protein product; Similar to fimbrial subunit type 1 precursor.
 
   
 0.872
phfD
PhfD protein; Similar to outer membrane usher protein precursor.
 
 
 0.855
phfC
PhfC protein; Similar to putative fimbrial chaperone.
 
 
 0.854
plu0268
Unnamed protein product; Similar to outer membrane usher protein precursor.
 
 
 0.851
plu0266
Unnamed protein product; Similar to putative fimbrial chaperone.
 
 
 0.849
plu0784
Unnamed protein product; Similar to outer membrane usher protein precursor.
 
 
 0.849
plu0791
Unnamed protein product; Similar to outer membrane usher protein precursor.
 
 
 0.849
plu3631
Unnamed protein product; Similar to probable fimbrial chaperone YcbR precursor of Escherichia coli.
 
 
 0.846
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.