STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2181Tautomerase domain-containing protein; Unnamed protein product; Similar to unknown protein YdcE of Escherichia coli; Belongs to the 4-oxalocrotonate tautomerase family. (74 aa)    
Predicted Functional Partners:
plu0307
Tautomerase; Unnamed protein product; Highly similar to putative 4-oxalocrotonate tautomerase.
     
  0.900
plu2182
Unnamed protein product; Similar to indigoidine systhesis protein and phosphoglycolate phosphatase.
       0.639
plu2905
Unnamed protein product; Similar to bacteriophage lambda endopeptidase.
  
     0.567
plu2180
Unnamed protein product; Similar to uracil phosphoribosyl transferase.
       0.562
plu3747
Unnamed protein product; Similar to probable endopeptidase gp15 protein of lamdoid prophage.
  
     0.554
plu1882
Sugarporin_N domain-containing protein; Unnamed protein product; Similar to putative glycoporin. Putative secreted protein.
  
     0.447
plu2933
Unnamed protein product; Similar to bacteriophage protein.
  
     0.427
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.