Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
plu2236FAD_binding_3 domain-containing protein; Unnamed protein product; Some similarities with probable monooxygenase. (411 aa)    
Predicted Functional Partners:
plu1322
FAD_binding_3 domain-containing protein; Unnamed protein product; Similar to 2.4-dihydroxybenzoate monooxygenase.
  
   
 0.750
plu4891
Methyltransf_2 domain-containing protein; Unnamed protein product; Some similarities with O-methyltransferase.
  
  
 0.639
plu4894
Methyltransf_2 domain-containing protein; Unnamed protein product; Some similarities with O-methyltransferase.
  
  
 0.626
plu4895
Methyltransf_2 domain-containing protein; Unnamed protein product; Some similarities with O-methyltransferase.
  
  
 0.623
plu4892
Methyltransf_2 domain-containing protein; Unnamed protein product; Some similarities with O-methyltransferase.
  
  
 0.615
plu4186
Unnamed protein product; Weakly similar to unknown protein; Belongs to the UPF0255 family.
 
     0.614
plu4890
Methyltransf_2 domain-containing protein; Unnamed protein product; Some similarities with O-methyltransferase.
  
  
 0.612
plu4298
HD_domain domain-containing protein; Unnamed protein product; Similar to unknown protein and some similarities with cyanamide hydratase.
  
     0.592
plu2351
NAD(P)-bd_dom domain-containing protein; Unnamed protein product; Similar to unknown protein.
  
    0.568
plu1437
FAD_binding_3 domain-containing protein; Unnamed protein product; Similar to 3-(3-hydroxy-phenyl) propionate hydroxylase MphA protein of Escherichia coli.
  
   
 0.553
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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