STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu2242DAO domain-containing protein; Unnamed protein product; Highly similar to probable D-amino acid oxidase. (375 aa)    
Predicted Functional Partners:
plu2240
Pyr_redox_2 domain-containing protein; Unnamed protein product; Similar to probable oxidoreductase. Putative transmembrane protein.
 
  
  0.994
plu2243
Unnamed protein product; Similar to unknown protein; Belongs to the proline racemase family.
 
  
 0.994
plu2241
Unnamed protein product; Similar to sarcosine oxidase and hydrogen cyanide synthase.
 
  
  0.993
plu2245
Unnamed protein product; Similar to probable dihydrodipicolinate synthetase; Belongs to the DapA family.
 
  
 0.969
plu2246
Aldedh domain-containing protein; Unnamed protein product; Highly similar to probable aldehyde dehydrogenase and similar to ketoglutarate semialdehyde dehydrogenase.
 
    0.665
plu2244
HTH araC/xylS-type domain-containing protein; Unnamed protein product; Highly similar to probable transcription regulator.
 
     0.658
plu4232
Unnamed protein product; Similar to monooxygenase.
   
  
 0.535
plu4258
Unnamed protein product; Similar to 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component HpaB.
      
 0.532
plu4259
Unnamed protein product; Similar to glutathione S-transferase; Belongs to the GST superfamily.
      
 0.532
thiG
Thiamin biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
  
 0.504
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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