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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2249Unnamed protein product; Some similarities with unknown protein. Putative secreted protein. (146 aa)    
Predicted Functional Partners:
plu2250
Unnamed protein product; Highly similar to unknown protein.
  
    0.534
plu2252
HicB-like domain-containing protein; Unnamed protein product; Similar to unknown protein from bacteriophage.
 
     0.505
plu2251
Toxin; Unnamed protein product; Similar to unknown protein; Belongs to the RelE toxin family.
       0.491
plu3720
HTH luxR-type domain-containing protein; Unnamed protein product; Similar to transcriptional regulator LuxR family.
  
     0.461
plu2003
HTH luxR-type domain-containing protein; Unnamed protein product; Similar to transcriptional regulator, LuxR family.
  
     0.445
plu2008
HTH luxR-type domain-containing protein; Unnamed protein product; Similar to transcriptional regulator, LuxR family.
  
     0.435
plu0922
HTH luxR-type domain-containing protein; Unnamed protein product; Weakly similar to transcriptional regulator, LuxR family.
  
    0.423
hutC
Histidine utilization repressor protein.
  
    0.422
plu2012
HTH luxR-type domain-containing protein; Unnamed protein product; Weakly similar to transcriptional regulator, LuxR family.
  
     0.420
plu0728
MFS domain-containing protein; Unnamed protein product; Similar to transporter (permease).
  
     0.417
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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