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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2270Unnamed protein product; Some similarities with unknown protein. (92 aa)    
Predicted Functional Partners:
plu2269
Unnamed protein product; Some similarities with unknown protein.
 
   0.943
plu2210
Unnamed protein product; Weakly similar to unknown protein.
 
   0.659
plu0284
Unnamed protein product; Similar to unknown protein YacB of Plasmid ColIb-P9.
 
   0.654
plu2372
Unnamed protein product; Highly similar to conserved plasmid protein.
 
   0.653
plu2368
Unnamed protein product; Similar to unknown protein.
 
 
   0.598
vapC
Ribonuclease VapC; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
   0.525
plu0808
HTH cro/C1-type domain-containing protein; Unnamed protein product; Similar to unknown protein.
  
     0.509
plu2169
Unnamed protein product; Similar to unknown protein.
  
   0.508
plu2369
Unnamed protein product; Similar to unknown protein.
 
     0.504
plu2306
Unnamed protein product; Similar to unknown protein.
  
   0.469
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.