STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2272Unnamed protein product; Similar to glucosylceramidase; Belongs to the glycosyl hydrolase 30 family. (437 aa)    
Predicted Functional Partners:
plu1799
Unnamed protein product; Similar to myo-inositol catabolism iolB of Bacillus subtilis.
   
    0.828
bglA
6-phospho-beta-glucosidase A; Belongs to the glycosyl hydrolase 1 family.
     
 0.710
plu3518
GH16 domain-containing protein; Unnamed protein product; Some similarities with putative secreted hydrolase.
 
   
 0.549
plu2271
Unnamed protein product; Similar to unknown protein.
       0.509
plu1800
AP_endonuc_2 domain-containing protein; Unnamed protein product; Similar to myo-inositol catabolism IolE of Bacillus subtilis and to rhizopine catabolism protein.
   
    0.488
uxaC
Uronate isomerase (glucuronate isomerase) (uronic isomerase).
  
     0.457
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
     0.424
plu4451
AAA_12 domain-containing protein; Unnamed protein product; Some weak similarities with DNA helicase related protein.
   
    0.420
plu4470
Unnamed protein product; Similar to putative integrase.
   
    0.419
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.