STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2295Unnamed protein product; Similar to VrgG protein. (668 aa)    
Predicted Functional Partners:
plu2299
Unnamed protein product; Similar to unknown protein.
 
  
 0.961
plu2296
Unnamed protein product; Some similarities with unknown protein.
 
    0.960
plu2292
ImpA_N domain-containing protein; Unnamed protein product; Similar to unknown protein.
 
  
 0.956
plu2297
Unnamed protein product; Similar to unknown protein.
 
    0.950
plu2301
Unnamed protein product; Similar to unknown protein.
 
  
 0.948
plu2290
Unnamed protein product; Similar to unknown protein.
 
    0.926
plu2300
Unnamed protein product; Similar to unknown protein.
 
  
 0.921
plu2288
ImcF-related_N domain-containing protein; Unnamed protein product; Some similarities with unknown protein and putative macrophage toxin.
 
  
 0.915
plu2289
DotU domain-containing protein; Unnamed protein product; Some similarities with unknown protein.
 
    0.914
plu2298
GPW_gp25 domain-containing protein; Unnamed protein product; Similar to unknown protein.
 
    0.905
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.