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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2313Uncharacterized protein; Truncated gene. Some similarities with beta-lactamase of Yersinia enterocolitica. (617 aa)    
Predicted Functional Partners:
plu0643
P/Homo B domain-containing protein; Unnamed protein product; The central region presents some similarities with proprotein convertase. Putative transmembrane protein.
 
  
 0.744
plu0461
Sulfatase domain-containing protein; Unnamed protein product; Some similarities with putative integral membrane protein.
  
     0.683
plu4425
Probable membrane transporter protein; Unnamed protein product; Similar to unknown protein.
  
    0.637
inh
Proteinase inhibitor Inh precursor; Inhibitor of the alkaline protease.
  
 
 0.635
plu4177
Pyosin/cloacin_T_dom domain-containing protein; Unnamed protein product; Some similarities with killer protein of pyocin S3 and highly similar to Photorhabdus luminescens unknown protein.
  
     0.604
plu1894
HNHc domain-containing protein; Unnamed protein product; Similar to pyocin S2 and S1.
  
     0.560
prtA
Alkaline metalloprotease precursor PrtA; Belongs to the peptidase M10B family.
  
     0.555
plu0340
MvaI_BcnI domain-containing protein; Unnamed protein product; Some similarities with unknown protein.
  
     0.542
plu0784
Unnamed protein product; Similar to outer membrane usher protein precursor.
  
    0.528
plu0791
Unnamed protein product; Similar to outer membrane usher protein precursor.
  
    0.528
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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