Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
plu2315HTH araC/xylS-type domain-containing protein; Unnamed protein product; Some similarities in the C-terminal part with transcription regulators. (323 aa)    
Predicted Functional Partners:
plu3775
HTH araC/xylS-type domain-containing protein; Unnamed protein product; Similar to the transcriptional activator protein ExsA/VirF.
  
     0.700
plu1810
HTH araC/xylS-type domain-containing protein; Unnamed protein product; Similar to transcription regulator.
  
   0.603
plu2316
Unnamed protein product; Similar to the pesticin receptor precursor FuyA (IRPC).
 
   
 0.513
plu2787
HTH araC/xylS-type domain-containing protein; Unnamed protein product; Similar to AraC-family transcriptional regulatory protein.
  
   
 0.509
plu1330
HTH araC/xylS-type domain-containing protein; Unnamed protein product; Similar to AraC-family transcriptional regulator.
  
   0.452
plu2318
Unnamed protein product; Similar to the lipoprotein inner membrane ABC-transporter Irp6 of Yersinia enterocolitica.
 
    0.447
plu2317
Unnamed protein product; Similar to putative transmembrane protein and signal transducers like Irp8. Putative transmembrane protein.
       0.417
plu2638
HTH araC/xylS-type domain-containing protein; Unnamed protein product; Similar to transcriptional regulator (AraC/XylS family).
  
     0.412
ISPlu3T
Transposase, IS630 family.
       0.410
plu2319
Unnamed protein product; Similar to the lipoprotein inner membrane ABC-transporter Irp6 of Yersinia enterocolitica.
 
    0.410
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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