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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2316Unnamed protein product; Similar to the pesticin receptor precursor FuyA (IRPC). (668 aa)    
Predicted Functional Partners:
plu2317
Unnamed protein product; Similar to putative transmembrane protein and signal transducers like Irp8. Putative transmembrane protein.
 
     0.843
fhuE
FhuE receptor precursor (Outer-membrane receptor for ferric iron uptake).
  
  
 0.721
plu3512
TonB_C domain-containing protein; Unnamed protein product; Some similarities with energy transducer TonB. Putative secreted protein.
 
 
 0.677
plu2717
TonB_C domain-containing protein; Unnamed protein product; Similar to unknown protein CjrB of Escherichia coli O164 and some similarities with inner-membrane protein TonB.
 
 
 0.661
plu0740
Unnamed protein product; Some similarities with probable transmembrane sensor.
 
  
 0.643
tonB
TonB protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.622
plu2318
Unnamed protein product; Similar to the lipoprotein inner membrane ABC-transporter Irp6 of Yersinia enterocolitica.
 
     0.619
plu2320
Unnamed protein product; Similar to HMWP2 protein of Yersinia enterocolitica.
 
  
 0.608
plu2850
Unnamed protein product; Similar to outer membrane protein precursor.
  
  
0.606
plu2853
Fe/B12 periplasmic-binding domain-containing protein; Unnamed protein product; Some similarities with iron(III) ABC transporter, periplasmic iron-binding protein.
  
  
 0.605
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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