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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu2318Unnamed protein product; Similar to the lipoprotein inner membrane ABC-transporter Irp6 of Yersinia enterocolitica. (572 aa)    
Predicted Functional Partners:
plu2319
Unnamed protein product; Similar to the lipoprotein inner membrane ABC-transporter Irp6 of Yersinia enterocolitica.
 
  
 
0.984
afuC
ABC transporter ATP-binding protein AfuC; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 
    
0.812
plu2320
Unnamed protein product; Similar to HMWP2 protein of Yersinia enterocolitica.
 
  
 0.780
dnaK
Chaperone protein (heat shock protein 70) (heat shock 70 kDa protein) (HSP70); Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
  0.635
plu2316
Unnamed protein product; Similar to the pesticin receptor precursor FuyA (IRPC).
 
     0.619
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
 
 
 0.611
plu2317
Unnamed protein product; Similar to putative transmembrane protein and signal transducers like Irp8. Putative transmembrane protein.
  
    0.582
plu1467
Unnamed protein product; Some similarities with ABC-type transport proteins.
  
 
  0.580
pstB
Phosphate transport system permease protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.573
plu2469
ABC transporter domain-containing protein; Unnamed protein product; Similar to N-terminal region of ATP-binding component of ABC transporter.
  
 
  0.566
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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