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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2409Unnamed protein product; Some similarities with unknown protein. (290 aa)    
Predicted Functional Partners:
plu2408
AMP-binding domain-containing protein; Unnamed protein product; Some similarities with D-alanine-D-alanyl carrier protein ligase.
       0.773
plu2410
Unnamed protein product; Unknown protein.
       0.773
plu2407
Unnamed protein product; Hypothetical gene.
       0.693
plu2411
Glyco_trans_2-like domain-containing protein; Unnamed protein product; Some similarities with glycosyltransferase.
   
 
 0.605
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
  
  
 0.456
inh
Proteinase inhibitor Inh precursor; Inhibitor of the alkaline protease.
   
 
 0.411
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.