Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
plu2458Glyco_18 domain-containing protein; Unnamed protein product; Similar to exochitinase. (622 aa)    
Predicted Functional Partners:
plu2461
Glyco_18 domain-containing protein; Unnamed protein product; Similar to exochitinase.
 
  
 
0.945
chb
Chitobiase precursor (N-acetyl-beta-glucosaminidase)-beta-N- acetylhexosaminidase).
 
  
 0.939
nagZ
Beta-hexosaminidase (N-acetyl-beta-glucosaminidase) (Beta-N-acetylhexosaminidase); Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
     
 0.904
plu2352
Chitin-binding type-4 domain-containing protein; Unnamed protein product; Similar to chitinase and chitin binding protein precursor.
 
   
 0.798
tccA2
Insecticidal toxin complex protein TccA2.
   
 
 0.746
tccB2
Insecticidal toxin complex protein TccB2.
   
 
 0.629
plu0958
N-acetyltransferase domain-containing protein; Unnamed protein product; Similar to unknown protein.
      
 0.531
dctA
C4-dicarboxylate transport protein; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate from the periplasm across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
      
 0.531
tccA1
Highly similar to insecticidal toxin complex protein TccA of W14.
    
 
 0.505
plu2456
YrdC-like domain-containing protein; Unnamed protein product; Highly similar to probable translation factor YciO of Escherichia coli; Belongs to the SUA5 family.
 
     0.461
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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