Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
plu2476FGE-sulfatase domain-containing protein; Unnamed protein product; Similar to TRP-2 protein encoded by the toxD gene of Burkholderia glumae, involved in toxoflavin biosynthesis. (342 aa)    
Predicted Functional Partners:
plu2475
Unnamed protein product; Similar to N-terminal region of WD-repeat protein, encoded by the toxC gene of Burkholderia glumae, involved in toxoflavin biosynthesis.
 
    0.863
plu2474
GTP_cyclohydro2 domain-containing protein; Unnamed protein product; Similar to GTP cyclohydrolase II, encoded by the toxB gene of Burkholderia glumae, involved in toxoflavin biosynthesis.
       0.777
cpmI
Similar to CarF, protein involved in resistance to carbapenem.
 
   
 0.714
cpmF
CpmF protein involved in carbapenem resistance.
  
     0.681
plu3530
Unnamed protein product; Similar to ATP-binding component (IM-ABC) of ABC transport system.
  
  
 0.426
ISPlu16B
Transposase, IS630 family.
       0.413
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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