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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2482STAS domain-containing protein; Unnamed protein product; Similar to sulfate permease family protein. (585 aa)    
Predicted Functional Partners:
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
  
 
 0.790
plu4416
Unnamed protein product; Similar to protein-tyrosine phosphatase.
 
 
   0.701
nuoM
NADH dehydrogenase I chain M (NADH-ubiquinone oxidoreductase chain M) (NUO13).
  
 
 0.608
sbcD
Nuclease sbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
   
   0.600
plu3369
ANK_REP_REGION domain-containing protein; Unnamed protein product; Some similarities with phospholipase A accessory protein.
    
 
 0.577
plu3370
Unnamed protein product; Similar to phospholipase A.
    
 
 0.577
ispZ
Probable intracellular septation protein IspZ; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
       0.519
plu4544
HTH Mu-type domain-containing protein; Unnamed protein product; Some similarities with the N-terminal region of the repressor protein CI and with Mu transposase.
  
     0.518
plu3647
Unnamed protein product; Similar to unknown protein.
  
     0.513
hmuR
Hemin receptor precursor.
  
     0.477
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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