fit to screen
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu2488UPF0263 protein plu2488; Unnamed protein product; Highly similar to unknown protein YciU of Escherichia coli; Belongs to the UPF0263 family. (109 aa)    
Predicted Functional Partners:
plu3186
Unnamed protein product; Highly similar to unknown protein YfcL of Escherichia coli.
  
     0.760
cpxP
Periplasmic protein precursor.
  
     0.759
plu3872
Unnamed protein product; Similar to putative lipoprotein YajG precursor of Escherichia coli.
  
     0.758
plu2480
OMP_b-brl domain-containing protein; Unnamed protein product; Similar to Ail protein precursor of Yersinia (OmpX).
  
     0.742
plu4557
Unnamed protein product; Highly similar to unknown protein YtfK of Escherichia coli.
  
     0.731
plu2479
Unnamed protein product; Similar to putative membrane protein YciC of Escherichia coli.
  
     0.730
atpI
ATP synthase protein I.
  
     0.729
plu2481
OMP_b-brl domain-containing protein; Unnamed protein product; Similar to Ail protein precursor of Yersinia (OmpX).
  
     0.726
plu2029
Unnamed protein product; Similar to unknown protein YecF of Escherichia coli.
  
     0.720
seqA
SeqA protein, negative modulator of initiation of replication; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated.
  
     0.712
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.