STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2509Aldolase_II domain-containing protein; Unnamed protein product; Similar to hypothetical aldolase class II protein YgbL of Escherichia coli. (219 aa)    
Predicted Functional Partners:
plu2508
Unnamed protein product; Similar to unknown protein YgbK of Escherichia coli.
  
 0.964
plu2510
AP_endonuc_2 domain-containing protein; Unnamed protein product; Similar to unknown protein YgbM of Escherichia coli; Belongs to the hyi family.
 
  
 0.923
plu2512
Epimerase domain-containing protein; Unnamed protein product; Similar to unknown protein and to probable UDP glucose 4-epimerase.
 
 
 0.805
plu2511
HTH deoR-type domain-containing protein; Unnamed protein product; Highly similar to hypothetical transcriptional regulator YgbI of Escherichia coli.
  
  
 0.795
plu2507
Unnamed protein product; Highly similar to hypothetical oxidoreductase YgbJ of Escherichia coli.
 
  
 0.685
plu3741
Unnamed protein product; Similar to L-ribulokinase AraB.
 
  
 0.668
plu4036
Arabinose 5-phosphate isomerase; Unnamed protein product; Highly similar to putative isomerase YrbH of Escherichia coli.
  
  
 0.512
plu2513
Unnamed protein product; Highly similar to gluconate permease (GntP). Putative transmembrane protein.
     
 0.498
adhE
Aldehyde-alcohol dehydrogenase [includes: alcohol dehydrogenase (ADH) and acetaldehyde dehydrogenase [acetylating] (ACDH); pyruvate-formate-lyase deactivase (PFL deactivase)]; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.481
gldA
Glycerol dehydrogenase (GLDH); Truncated gene. Weakly similar to the central region of L-fuculokinase.
  
  
 0.477
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.