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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pncAPyrazinamidase/nicotinamidase [Includes: Pyrazinamidase (PZASE); Nicotinamidase (Nicotine deamidase)]. (212 aa)    
Predicted Functional Partners:
pcnB-2
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
 
 
 0.966
cobB
CobB protein; Belongs to the sirtuin family. Class III subfamily.
  
 0.910
plu2773
IU_nuc_hydro domain-containing protein; Unnamed protein product; Similar to nucleoside hydrolase.
     
 0.904
iunH
Inosine-uridine preferring nucleoside hydrolase (IU-nucleoside hydrolase) (purine nucleosidase); Belongs to the IUNH family.
     
 0.904
deoD
Purine-nucleoside phosphorylase (inosine phosphorylase) (PNP).
    
  0.900
ansA
L-asparaginase I (L-asparagine amidohydrolase I) (L-asnase I).
  
    0.850
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
  
 
 0.521
nadE
NH(3)-dependent NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.508
trmJ
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.
 
      0.493
sppA
Protease IV (endopeptidase IV) (signal peptide peptidase).
       0.487
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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