STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mppAPeriplasmic murein peptide-binding protein precursor. (540 aa)    
Predicted Functional Partners:
oppB
Oligopeptide transport system permease protein OppB.
 
 0.983
oppC
Oligopeptide transport system permease protein OppC.
 
 
 0.981
oppF
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 
 
 0.977
oppD
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 
 
 0.977
sapB
Peptide transport system permease protein SapB.
  
  
  0.944
sapC
Peptide transport system permease protein SapC.
  
  
 0.938
sapA
Peptide transport periplasmic protein SapA precursor.
 
 
0.923
plu2350
SBP_bac_5 domain-containing protein; Unnamed protein product; Similar to oligopeptide-binding protein precursor.
  
  
 
0.909
oppA1
Periplasmic-binding protein precursor OppA1.
 
  
 
0.908
plu2212
SBP_bac_5 domain-containing protein; Unnamed protein product; Highly similar to oligopeptide-binding protein precursor OppA.
  
  
 
0.907
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.