close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pspCPhage shock protein C. (117 aa)    
Predicted Functional Partners:
pspB
Phage shock protein B.
 
 
 0.998
pspA
Phage shock protein A.
 
 
 0.996
arcB
Aerobic respiration control sensor protein.
   
 
 0.910
plu4313
Unnamed protein product; Similar to unknown protein.
 
 
 0.896
bvgS
Virulence sensor protein BvgS precursor.
  
 
 0.841
barA
Sensor protein BarA.
   
 
 0.837
pspF
Psp operon transcriptional activator PspF.
 
     0.740
plu2581
Unnamed protein product; Highly similar to membrane protein YcjF of Escherichia coli.
 
   
 0.735
plu3313
Unnamed protein product; Highly similar to putative sensor-like histidine kinase (two-component sensor protein kinase) YfhK of Escherichia coli.
  
   0.718
rcsD
Phosphotransferase RcsD; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB.
  
 
 0.696
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.