Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
sapDPeptide transport system ATP-binding protein SapD; Belongs to the ABC transporter superfamily. (330 aa)    
Predicted Functional Partners:
sapB
Peptide transport system permease protein SapB.
 
 
 0.990
dppC
Dipeptide transport system permease protein DppC.
 
   
 0.976
sapC
Peptide transport system permease protein SapC.
  
 0.955
oppC
Oligopeptide transport system permease protein OppC.
 
   
 0.945
artP
Arginine transport ATP-binding protein ArtP.
 
    
0.858
afuC
ABC transporter ATP-binding protein AfuC; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 
    
0.848
gltL
Glutamate/aspartate transport ATP-binding protein GltL.
 
     
0.848
sapA
Peptide transport periplasmic protein SapA precursor.
 
  
 0.845
pstB
Phosphate transport system permease protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.787
sapF
Peptide transport system ATP-binding protein SapF.
 
  
0.783
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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