Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
plu2604Glutaredoxin; Unnamed protein product; Highly similar to probable glutaredoxin-like protein YdhD of Escherichia coli; Belongs to the glutaredoxin family. Monothiol subfamily. (116 aa)    
Predicted Functional Partners:
bolA
BolA protein; Belongs to the BolA/IbaG family.
 
 
 0.910
nfuA
Fe/S biogenesis protein NfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
  
 0.760
ubiH
2-octaprenyl-6-methoxyphenol hydroxylase.
  
     0.690
plu4029
Unnamed protein product; Highly similar to unknown protein YrbA of Escherichia coli; Belongs to the BolA/IbaG family.
 
 
 
 0.664
visC
Probable monooxygenase VisC.
  
     0.644
ubiF
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase UbiF.
  
     0.595
ubiG
Ubiquinone biosynthesis O-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
  
 
   0.589
erpA
Iron-sulfur cluster insertion protein ErpA; Required for insertion of 4Fe-4S clusters for at least IspG.
 
 0.587
gshB
Glutathione synthase (glutathione synthase) (GSH synthetase) (GSH-S).
  
     0.571
gatY
Tagatose-bisphosphate aldolase GatY.
    
 
 0.565
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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