STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
btuCVitamin B12 transport system permease protein BtuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane. (335 aa)    
Predicted Functional Partners:
btuD
Vitamin B12 transport ATP-binding protein BtuD (Vitamin B12-transporting ATPase); Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.
 
 
 0.996
btuF
Vitamin B12 transport protein BtuF precursor; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC.
 
 
 0.990
fecE
Iron(III) dicitrate transport ATP-binding protein FecE.
 
     0.778
fepC
Ferric enterobactin transport ATP-binding protein FepC.
 
   
 0.773
hmuV
Hemin import ATP-binding protein HmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
  
     0.765
fepB
Ferric enterobactin binding periplasmic protein precursor FepB.
 
 
 
 0.722
plu2853
Fe/B12 periplasmic-binding domain-containing protein; Unnamed protein product; Some similarities with iron(III) ABC transporter, periplasmic iron-binding protein.
 
 
 
 0.689
pheT
phenylalanyl-tRNA synthetase beta chain (phenylalanine--tRNA ligase beta chain); Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.679
plu3738
Fe/B12 periplasmic-binding domain-containing protein; Unnamed protein product; Some similarities with putative iron(III) ABC transporter, periplasmic iron-binding protein.
 
 
 
 0.669
ihfA
Integration host factor alpha chain (IHF-alpha); This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
       0.656
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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