Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
prcTail-specific protease precursor (protease RE) (PRC protein); Belongs to the peptidase S41A family. (683 aa)    
Predicted Functional Partners:
proQ
ProP effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities. May regulate ProP activity through an RNA-based, post-transcriptional mechanism. Belongs to the ProQ family.
 
  
 0.900
nlpI
Lipoprotein NlpI precursor; May be involved in cell division.
  
 
 
 0.825
spr
Lipoprotein spr precursor.
    
 
 0.773
plu2684
GAF domain-containing protein; Unnamed protein product; Similar to probable membrane protein YebR of Escherichia coli.
     
 0.748
plu4841
Peptidase_M23 domain-containing protein; Unnamed protein product; Similar to putative membrane protein YibP of Escherichia coli.
  
  
 0.645
plu3757
TPR_REGION domain-containing protein; Unnamed protein product; Similar to low calcium response locus protein H LcrH.
  
 
 0.634
bepA
Beta-barrel assembly-enhancing protease; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.
 
 
 0.624
nlpC
Probable lipoprotein NlpC precursor.
    
 
 0.558
ecfE
Protease EcfE.
 
  
 0.505
htpX
Protease HtpX (heat shock protein); Belongs to the peptidase M48B family.
     
 0.503
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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