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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prcTail-specific protease precursor (protease RE) (PRC protein); Belongs to the peptidase S41A family. (683 aa)    
Predicted Functional Partners:
proQ
ProP effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities. May regulate ProP activity through an RNA-based, post-transcriptional mechanism. Belongs to the ProQ family.
 
  
 0.869
nlpI
Lipoprotein NlpI precursor; May be involved in cell division.
  
 
 
 0.769
plu2684
GAF domain-containing protein; Unnamed protein product; Similar to probable membrane protein YebR of Escherichia coli.
     
 0.648
plu4841
Peptidase_M23 domain-containing protein; Unnamed protein product; Similar to putative membrane protein YibP of Escherichia coli.
  
  
 0.527
arcB
Aerobic respiration control sensor protein.
 
   
 0.511
bvgS
Virulence sensor protein BvgS precursor.
   
 
 0.508
plu0643
P/Homo B domain-containing protein; Unnamed protein product; The central region presents some similarities with proprotein convertase. Putative transmembrane protein.
   
 
 0.482
ecfE
Protease EcfE.
 
  
 0.473
htpX
Protease HtpX (heat shock protein); Belongs to the peptidase M48B family.
     
 0.466
nfuA
Fe/S biogenesis protein NfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
 
     0.462
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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