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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2708Abi_C domain-containing protein; Unnamed protein product; Some similarities with unknown protein. (270 aa)    
Predicted Functional Partners:
plu2709
Type-2 restriction enzyme; Recognizes the double-stranded sequence CTCGAG and cleaves after C-1; Belongs to the type II restriction enzyme XhoI family.
       0.773
plu2710
Unnamed protein product; Almost identical to DNA modification methylase PAER7I (adenine-specific DNA-methyltransferase).
       0.773
fdoH
Formate dehydrogenase iron-sulfur subunit; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers.
  
    0.727
plu1158
Unnamed protein product; Similar to unknown protein STY4592 of Salmonella enterica subsp. enterica serovar Typhi.
  
  
 0.449
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.