STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2717TonB_C domain-containing protein; Unnamed protein product; Similar to unknown protein CjrB of Escherichia coli O164 and some similarities with inner-membrane protein TonB. (266 aa)    
Predicted Functional Partners:
plu2715
Unnamed protein product; Similar to outer membrane siderophore receptor CjrC of Escherichia coli O164.
 
 
 0.919
exbD
Biopolymer transport protein ExbD.
 
 
 0.819
plu3513
Unnamed protein product; Some similarities with heme receptor HasR.
 
 
 0.813
exbB
Biopolymer transport protein ExbB.
 
 
 0.794
plu0739
STN domain-containing protein; Unnamed protein product; Similar to Outer Membrane Receptor (OMR).
 
 
 0.782
hemR
Hemin receptor precursor protein HemR.
 
 
 0.750
tolR
TolR protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. Required, with TolQ, for the proton motive force-dependent activation of TolA and for TolA-Pal interaction.
  
 
 0.735
plu3838
Unnamed protein product; Similar to outer membrane hemin receptor precursor.
 
 
 0.715
plu2718
Cofac_haem_bdg domain-containing protein; Unnamed protein product; Similar to unknown protein CjrA of Escherichia coli O164.
 
  
 0.700
plu2850
Unnamed protein product; Similar to outer membrane protein precursor.
 
 
 0.679
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.