STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
entA2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesis. (248 aa)    
Predicted Functional Partners:
entE
2,3-dihydroxybenzoate--[carrier protein] ligase (enterobactin synthetase component E).
 
 0.991
entB
Isochorismatase (2,3-dihydro-2,3-dihydroxybenzoate synthetase).
 
 
 0.990
ngrA
4'-phosphopantetheinyl tranferase; Belongs to the P-Pant transferase superfamily.
  
 
 0.949
plu2324
Unnamed protein product; N-terminal region highly similar Irp5 protein and C-terminal region similar to Irp9 protein of Yersinia enterocolitica.
 
 
 0.817
nuoC
NADH dehydrogenase I chain C/D (NADH-ubiquinone oxidoreductase chain 3/4) (NUO3/NUO4); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
   
 
 0.781
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
 
 
 0.749
plu1880
Unnamed protein product; Similar to proteins involved in antibiotic biosynthesis. Putative transmembrane protein.
 
 
 0.709
plu1878
Carrier domain-containing protein; Unnamed protein product; Similar to antibiotic synthetase.
 
 0.624
plu2642
Carrier domain-containing protein; Unnamed protein product; Similar to proteins involved in antibiotic biosynthesis. Putative transmembrane protein.
 
 0.557
plu2737
Carrier domain-containing protein; Unnamed protein product; Some similarities with isochorismatase.
  
  
 0.504
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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