STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2741Unnamed protein product; Similar to ABC transporter, ATP-binding protein and permease. (551 aa)    
Predicted Functional Partners:
plu2742
Unnamed protein product; Similar to ABC transporter, ATP-binding protein and permease.
 
    
0.844
plu1467
Unnamed protein product; Some similarities with ABC-type transport proteins.
  
 0.771
plu2469
ABC transporter domain-containing protein; Unnamed protein product; Similar to N-terminal region of ATP-binding component of ABC transporter.
  
 0.762
plu0571
Unnamed protein product; Similar to putative AAA-family ATPase gene.
  
 
  0.679
plu0554
Unnamed protein product; Similar to ABC transporter, ATP-binding protein.
 
     0.675
plu2735
Unnamed protein product; Similar to ABC transporter (ATP-binding protein subunit).
 
     0.627
plu2648
Unnamed protein product; Highly similar to ATP-binding component of ABC transporter.
 
     0.620
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
  
 0.604
plu1880
Unnamed protein product; Similar to proteins involved in antibiotic biosynthesis. Putative transmembrane protein.
  
 0.587
btuD
Vitamin B12 transport ATP-binding protein BtuD (Vitamin B12-transporting ATPase); Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.
  
     0.563
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.