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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2779UPF0339 protein plu2779; Unnamed protein product; Similar to unknown protein YegP of Escherichia coli; Belongs to the UPF0339 family. Duplicated subfamily. (114 aa)    
Predicted Functional Partners:
baeR
Two-component response regulator.
  
    0.549
baeS
Two-component sensor kinase.
       0.548
plu1661
Unnamed protein product; Similar to unknown protein.
  
   0.535
plu1683
Unnamed protein product; Similar to unknown protein.
  
   0.535
plu1702
Unnamed protein product; Similar to unknown protein.
  
   0.535
plu1724
Unnamed protein product; Similar to unknown protein.
  
   0.535
plu2391
Unnamed protein product; Hypothetical conserved protein with two candidate membrane-spanning segments.
  
   0.535
plu2525
Unnamed protein product; Highly similar to unknown protein of Photorhabdus.
  
   0.535
plu2685
Unnamed protein product; Similar to unknown protein Yebv of Escherichia coli.
   
    0.452
fbaB
Fructose-biphosphate aldolase class I (FBP aldolase).
   
    0.452
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.